JupyterHub: Added MATLAB Kernel & Web App

Matlab: System Wide MATLAB Installation
Matlab License Server
2024-02-07 17:20:01 -05:00 · 2024-02-07 14:00:16 -05:00 · 2024-02-07 14:00:11 -05:00 · 2024-02-02 18:27:57 -05:00 · 2024-01-23 14:06:26 -05:00 · 2024-01-17 17:23:08 -05:00
16 changed files with 912 additions and 117 deletions
--- a/flake.lock
+++ b/flake.lock
@ -39,16 +39,16 @@
    },
    "nixpkgs": {
      "locked": {
-        "lastModified": 1704290814,
-        "narHash": "sha256-LWvKHp7kGxk/GEtlrGYV68qIvPHkU9iToomNFGagixU=",
+        "lastModified": 1705331948,
+        "narHash": "sha256-qjQXfvrAT1/RKDFAMdl8Hw3m4tLVvMCc8fMqzJv0pP4=",
        "owner": "NixOS",
        "repo": "nixpkgs",
-        "rev": "70bdadeb94ffc8806c0570eb5c2695ad29f0e421",
+        "rev": "b8dd8be3c790215716e7c12b247f45ca525867e2",
        "type": "github"
      },
      "original": {
        "owner": "NixOS",
-        "ref": "nixos-23.05",
+        "ref": "nixos-23.11",
        "repo": "nixpkgs",
        "type": "github"
      }
--- a/flake.nix
+++ b/flake.nix
@ -1,7 +1,7 @@
 {
  inputs = {
    nixpkgs = {
-      url = "github:NixOS/nixpkgs/nixos-23.05";
+      url = "github:NixOS/nixpkgs/nixos-23.11";
    };
    nixpkgs-unstable = {
      url = "github:NixOS/nixpkgs/nixos-unstable";
--- a/machines/kcnhub/configuration.nix
+++ b/machines/kcnhub/configuration.nix
@ -20,6 +20,7 @@
      ./nosleep.nix
    ];

+  sops.age.keyFile = "/root/.config/sops/age/keys.txt";
  sops.defaultSopsFile = ./secrets/system.yaml;

  # Support NTFS(3g)
--- a/machines/kcnhub/hardware-configuration.nix
+++ b/machines/kcnhub/hardware-configuration.nix
@ -21,7 +21,7 @@
  ];
  boot.kernelModules = [ "kvm-intel" ];
  boot.extraModulePackages = [ ];
-  boot.initrd.services.swraid.enable = true;
+  boot.swraid.enable = true;

  # Cache and Thin Provisioning Support
  services.lvm.boot.thin.enable = true;
--- a/machines/kcnhub/nvidia.nix
+++ b/machines/kcnhub/nvidia.nix
@ -1,5 +1,4 @@
 { config, lib, pkgs, ...}: {
-  config = {
  # Make sure opengl is enabled
  hardware.opengl = {
    enable = true;
@ -21,7 +20,8 @@

    # Use the open source version of the kernel module
    # Only available on driver 515.43.04+
-    open = true;
+    # Seems to cause some issues with Tensorflow/CUDA/PyTorch
+    open = false;

    # Enable the nvidia settings menu
    nvidiaSettings = true;
@ -32,15 +32,15 @@

  # Allow Unfree, Nvidia, CUDA, and derived packages.
  nixpkgs.config.allowUnfree = true;
+  nixpkgs.config.cudaSupport = true;

  # Use Prebuilt Cached Versions of CUDA Packages
  nix.settings = {
-    trusted-substituters = [
+    substituters = [
      "https://cuda-maintainers.cachix.org"
    ];
    trusted-public-keys = [
      "cuda-maintainers.cachix.org-1:0dq3bujKpuEPMCX6U4WylrUDZ9JyUG0VpVZa7CNfq5E="
    ];
  };
-};
 }
--- a/machines/kcnhub/packages/matlab.nix
+++ b/machines/kcnhub/packages/matlab.nix
@ -1,57 +1,150 @@
 { config, lib, pkgs, nix-matlab, ... }: let
-  license-manager = pkgs.stdenv.mkDerivation rec {
-    pname = "matlab-license-server";
-    version = "R2023b";
+  # The matlab installation is held in the MATLAB_INSTALL_DIR MATLAB
+  # updates and toolboxes can primarily be handled with the matlab_mpm
+  # tool defined below. This file, alongside the matlab_install.txt
+  # describe the current version of MATLAB available on the
+  # system. Nix *can* fetch MATLAB and all its toolboxes, however not
+  # all MATLAB toolboxes can be installed via commands, some *must* be
+  # installed graphically, and otherwise are unsupported. So, for now,
+  # we try to make installation as documented and reproducible as
+  # possible.
+
+  MATLAB_INSTALL_DIR = "/opt/MATLAB";
+
+  # MATLAB Package Manager: MPM
+  #
+  # This tool is used to guarantee (nearly)
+  # reproducible installations of MATLAB, and to easily allow for
+  # controlling what version of MATLAB is currently installed
+  
+  matlab-mpm = pkgs.stdenv.mkDerivation rec {
+    pname = "matlab-package-manager";
+    version = "2023.12.1";
+
    src = pkgs.fetchurl {
-      url = "https://ssd.mathworks.com/supportfiles/downloads/${version}/license_manager/${version}/daemons/glnxa64/mathworks_network_license_manager_glnxa64.zip";
-      hash = "sha256-Btl3ETzTtAV+cjqwXf4AE4QJCtssN1s6dmmcpR1EQxY=";
+      url = "https://ssd.mathworks.com/supportfiles/downloads/mpm/${version}/glnxa64/mpm";
+      hash = "sha256-NlfPLDnpRIaKLLuIZAudnFHBKL04gzmypzp98QOa6+g=";
    };
-    nativeBuildInputs = [
-      pkgs.autoPatchelfHook
+
+    nativeBuildInputs = with pkgs; [
+      autoPatchelfHook
    ];
-    unpackPhase = ''
-      ${pkgs.unzip}/bin/unzip $src
+
+    buildInputs = with pkgs; [
+      gawk
+      gnugrep
+      unzip
+
+      linux-pam
+      libz
+    ];
+
+    unpackPhase = "cp $src ./mpm";
+
+    buildPhase = ''
+      tail -n +$(head -n20 ./mpm | grep "tail -n" | awk '{print $3}' | grep -o -E "[0-9]+") ./mpm > ./mpm.zip
    '';
+    
    installPhase = ''
-      mkdir $out
-      cp -r * $out/
-      addAutoPatchelfSearchPath $out/*
+      unzip -d $out ./mpm.zip
+    '';
+
+    passthru = {
+      executable = "bin/glnxa64/mpm";
+    };
+  };
+
+
+  # Environment with the dependencies needed to run matlab (and
+  # matlab's installers)
+  matlab-env = pkgs.buildFHSUserEnv {
+    name = "matlab-env";
+    targetPkgs = (ps: nix-matlab.targetPkgs ps);
+  };
+
+  # Script used to get the most up to date version of the desired MATLAB
+  matlab-update-script = pkgs.writeScriptBin "matlab_update_installation.sh" ''
+    #!${pkgs.bash}/bin/bash
+
+    if [ "''${EUID:-$(id -u)}" -ne 0 ]; then
+      echo "Please make sure to run this script as root"
+      exit -1
+    fi
+
+    if [ ! -d "${MATLAB_INSTALL_DIR}" ]; then
+      echo "Make sure that '${MATLAB_INSTALL_DIR}' exists"
+      exit -1
+    fi
+
+    cd ${MATLAB_INSTALL_DIR}
+    cp ${./matlab/install_file.txt} ./install_file.txt
+    sed -e "s#@MATLAB_INSTALL_DIR@#${MATLAB_INSTALL_DIR}#" -i ./install_file.txt
+
+    ${matlab-env}/bin/${matlab-env.name} -c '${matlab-mpm}/${matlab-mpm.executable} install --inputfile ./install_file.txt'
+  '';
+  
+  desktopItem = pkgs.makeDesktopItem {
+    desktopName = "Matlab";
+    name = "matlab";
+    # We use substituteInPlace after we run `install`
+    # -desktop is needed, see:
+    # https://www.mathworks.com/matlabcentral/answers/20-how-do-i-make-a-desktop-launcher-for-matlab-in-linux#answer_25
+    exec = "@out@/bin/matlab -desktop %F";
+    icon = "matlab";
+    # Most of the following are copied from octave's desktop launcher
+    categories = [
+      "Utility"
+      "TextEditor"
+      "Development"
+      "IDE"
+    ];
+    mimeTypes = [
+      "text/x-octave"
+      "text/x-matlab"
+    ];
+    keywords = [
+      "science"
+      "math"
+      "matrix"
+      "numerical computation"
+      "plotting"
+    ];
+  };
+
+  # Produce acessible executables to "f", e.g. "matlab" or "mex"
+  matlab-run = f: pkgs.buildFHSUserEnv {
+    name = f;
+    targetPkgs = nix-matlab.targetPkgs;
+    # If making MATLAB available, create Application Icon etc.
+    extraInstallCommands = pkgs.lib.strings.optionalString (f == "matlab") ''
+      install -Dm644 ${desktopItem}/share/applications/matlab.desktop $out/share/applications/matlab.desktop
+      substituteInPlace $out/share/applications/matlab.desktop \
+        --replace "@out@" ${placeholder "out"}
+      install -Dm644 ${nix-matlab}/icons/hicolor/256x256/matlab.png $out/share/icons/hicolor/256x256/matlab.png
+      install -Dm644 ${nix-matlab}/icons/hicolor/512x512/matlab.png $out/share/icons/hicolor/512x512/matlab.png
+      install -Dm644 ${nix-matlab}/icons/hicolor/64x64/matlab.png $out/share/icons/hicolor/64x64/matlab.png
+    '';
+    runScript = pkgs.writeScript "matlab-run-${f}-script" ''
+      export QT_QPA_PLATFORM=xcb
+      ${MATLAB_INSTALL_DIR}/bin/${f} "$@"
    '';
  };
-  matlab-server = pkgs.buildFHSUserEnv {
-    name = "matlab-server";

-    targetPkgs = (ps: nix-matlab.targetPkgs ps ++ [
-      license-manager
-    ]);
-
-    runScript = pkgs.writeScript "matlab-server" (nix-matlab.shellHooksCommon + ''
-      exec $MATLAB_INSTALL_DIR/bin/matlab "$@"
-    '');
-  };
-  matlab-server-shell = pkgs.buildFHSUserEnv {
-    name = "matlab-server-shell";
-
-    targetPkgs = (ps: nix-matlab.targetPkgs ps ++ [
-      license-manager
-    ]);
-
-    runScript = pkgs.writeScript "matlab-server-shell" (nix-matlab.shellHooksCommon + ''
-      echo license-server is in:
-      echo ${license-manager}
-      echo Make sure it is installed (matlab-server user)
-      exec bash
-    '');
-  };
 in {
-  environment.systemPackages = (with nix-matlab.packages.x86_64-linux; [
+  environment.sessionVariables = {
+    inherit MATLAB_INSTALL_DIR;
+  };
+  nixpkgs.overlays = [
+    (final: prev: {
+      inherit matlab-update-script;
+      matlab = (matlab-run "matlab");
+      matlab-mex = (matlab-run "mex");
+    })
+  ];
+  environment.systemPackages =(with pkgs; [
+    matlab-update-script
    matlab
-    matlab-shell
-    matlab-server
-    matlab-server-shell
-    matlab-mlint
    matlab-mex
-  ]) ++ (with pkgs; [
    octaveFull
  ]);
 }
--- a/machines/kcnhub/packages/matlab/install_file.txt
+++ b/machines/kcnhub/packages/matlab/install_file.txt
@ -0,0 +1,387 @@
+########################################################################
+## Configuration File for Installing R2023b MathWorks Products
+########################################################################
+##
+## Use this file to configure an installation of MathWorks products
+## and support packages from the command line using the
+## MATLAB Package Manager (mpm). For example, you can set the
+## products and support packages you want to install and the 
+## folder where you want to install them.
+##
+## To configure your MATLAB installation:
+##
+## 1. Set configuration parameters by uncommenting lines that
+##    start with a single '#' and updating the values. The
+##    comments above each parameter describe the valid values.
+##
+## 2. Run mpm from the command line, using the --inputfile option
+##    to specify the full path to this configuration file.
+##
+##    mpm install --inputfile <full_path_to_this_file>
+##
+## You can download template input files for all supported releases from
+## https://github.com/mathworks-ref-arch/matlab-dockerfile/blob/main/MPM.md
+##
+########################################################################
+
+
+########################################################################
+## RELEASE
+########################################################################
+##
+## By default, mpm installs the latest versions of R2023b 
+## MathWorks products and support packages.
+##
+## To install a specific update for R2023b, set the desired update
+## number (for example, 1, 2, 3, and so on) and uncomment the
+## following line. An updateLevel of 0 installs the general release.
+
+# Needs to be fixed value to allow for consistent hash output
+# Check https://www.mathworks.com/content/dam/mathworks/mathworks-dot-com/support/updates/r2023b/r2023b-updates-release-notes.pdf
+# or relevant page to matlab version for existing update numbers
+updateLevel=6
+
+
+########################################################################
+## SPECIFY DESTINATION FOLDER
+########################################################################
+##
+## Specify the full path to the folder where you want to install MATLAB.
+## If you are adding products or support packages to an existing MATLAB
+## installation, specify the full path to the folder where MATLAB is installed.
+##
+## Example:
+## (Windows) destinationFolder=C:\Program Files\MATLAB\RXXXX
+## (Linux) destinationFolder=/usr/local/RXXXX
+## (macOS) destinationFolder=/Applications
+##
+## Set the desired value for destinationFolder and
+## uncomment the following line.
+
+# This will be substited with the output path of the nix derivation:
+# https://nixos.org/manual/nixpkgs/stable/#fun-substitute
+destinationFolder=@MATLAB_INSTALL_DIR@
+
+########################################################################
+## INSTALL PRODUCTS
+########################################################################
+##
+## Uncomment the lines for the products you want to install.
+
+product.5G_Toolbox
+product.AUTOSAR_Blockset
+product.Aerospace_Blockset
+product.Aerospace_Toolbox
+product.Antenna_Toolbox
+product.Audio_Toolbox
+product.Automated_Driving_Toolbox
+product.Bioinformatics_Toolbox
+product.Bluetooth_Toolbox
+#product.C2000_Microcontroller_Blockset
+#product.Communications_Toolbox
+#product.Computer_Vision_Toolbox
+#product.Control_System_Toolbox
+product.Curve_Fitting_Toolbox
+product.DDS_Blockset
+product.DSP_HDL_Toolbox
+product.DSP_System_Toolbox
+#product.Data_Acquisition_Toolbox
+product.Database_Toolbox
+product.Datafeed_Toolbox
+product.Deep_Learning_HDL_Toolbox
+product.Deep_Learning_Toolbox
+product.Econometrics_Toolbox
+#product.Embedded_Coder
+product.Filter_Design_HDL_Coder
+#product.Financial_Instruments_Toolbox
+product.Financial_Toolbox
+product.Fixed-Point_Designer
+product.Fuzzy_Logic_Toolbox
+product.GPU_Coder
+#product.Global_Optimization_Toolbox
+#product.HDL_Coder
+#product.HDL_Verifier
+product.Image_Acquisition_Toolbox
+#product.Image_Processing_Toolbox
+#product.Industrial_Communication_Toolbox
+#product.Instrument_Control_Toolbox
+#product.LTE_Toolbox
+#product.Lidar_Toolbox
+product.MATLAB
+product.MATLAB_Coder
+product.MATLAB_Compiler
+product.MATLAB_Compiler_SDK
+#product.MATLAB_Parallel_Server
+#product.MATLAB_Production_Server
+product.MATLAB_Report_Generator
+product.MATLAB_Test
+product.MATLAB_Web_App_Server
+product.Mapping_Toolbox
+product.Medical_Imaging_Toolbox
+#product.Mixed-Signal_Blockset
+#product.Model_Predictive_Control_Toolbox
+#product.Model-Based_Calibration_Toolbox
+#product.Motor_Control_Blockset
+product.Navigation_Toolbox
+product.Optimization_Toolbox
+product.Parallel_Computing_Toolbox
+product.Partial_Differential_Equation_Toolbox
+product.Phased_Array_System_Toolbox
+#product.Polyspace_Bug_Finder
+#product.Polyspace_Bug_Finder_Server
+#product.Polyspace_Code_Prover
+#product.Polyspace_Code_Prover_Server
+#product.Polyspace_Test
+#product.Powertrain_Blockset
+#product.Predictive_Maintenance_Toolbox
+#product.RF_Blockset
+#product.RF_PCB_Toolbox
+#product.RF_Toolbox
+#product.ROS_Toolbox
+#product.Radar_Toolbox
+#product.Reinforcement_Learning_Toolbox
+#product.Requirements_Toolbox
+product.Risk_Management_Toolbox
+product.Robotics_System_Toolbox
+#product.Robust_Control_Toolbox
+#product.Satellite_Communications_Toolbox
+product.Sensor_Fusion_and_Tracking_Toolbox
+product.SerDes_Toolbox
+product.Signal_Integrity_Toolbox
+#product.Signal_Processing_Toolbox
+product.SimBiology
+product.SimEvents
+product.Simscape
+product.Simscape_Battery
+#product.Simscape_Driveline
+#product.Simscape_Electrical
+#product.Simscape_Fluids
+#product.Simscape_Multibody
+product.Simulink
+#product.Simulink_3D_Animation
+#product.Simulink_Check
+#product.Simulink_Coder
+product.Simulink_Compiler
+product.Simulink_Control_Design
+product.Simulink_Coverage
+product.Simulink_Design_Optimization
+product.Simulink_Design_Verifier
+#product.Simulink_Desktop_Real-Time
+product.Simulink_Fault_Analyzer
+product.Simulink_PLC_Coder
+#product.Simulink_Real-Time
+product.Simulink_Report_Generator
+product.Simulink_Test
+product.SoC_Blockset
+#product.Spreadsheet_Link
+product.Stateflow
+product.Statistics_and_Machine_Learning_Toolbox
+product.Symbolic_Math_Toolbox
+product.System_Composer
+#product.System_Identification_Toolbox
+product.Text_Analytics_Toolbox
+#product.UAV_Toolbox
+#product.Vehicle_Dynamics_Blockset
+#product.Vehicle_Network_Toolbox
+product.Vision_HDL_Toolbox
+#product.WLAN_Toolbox
+#product.Wavelet_Toolbox
+#product.Wireless_HDL_Toolbox
+#product.Wireless_Testbench
+
+
+########################################################################
+## INSTALL SUPPORT PACKAGES
+########################################################################
+##
+## Uncomment the lines for the support packages you want to install.
+
+#product._Automated_Driving_Toolbox_Model_for_Lidar_Lane_Detection
+#product.ASIC_Testbench_for_HDL_Verifier
+#product.Aerospace_Blockset_Interface_for_Unreal_Engine_Projects
+#product.Automated_Driving_Toolbox_Importer_for_Zenrin_Japan_Map_API_3.0_(Itsumo_NAVI_API_3.0)_Service
+#product.Automated_Driving_Toolbox_Interface_for_Unreal_Engine_4_Projects
+#product.CI/CD_Automation_for_Simulink_Check
+#product.Communications_Toolbox_Support_Package_for_Analog_Devices_ADALM-Pluto_Radio
+#product.Communications_Toolbox_Support_Package_for_RTL-SDR_Radio
+#product.Communications_Toolbox_Support_Package_for_USRP_Embedded_Series_Radio
+#product.Communications_Toolbox_Support_Package_for_USRP_Radio
+#product.Communications_Toolbox_Support_Package_for_Xilinx_Zynq-Based_Radio
+#product.Communications_Toolbox_Wireless_Network_Simulation_Library
+#product.Component_Deployment_Guideline_for_Embedded_Coder
+#product.Computer_Vision_Toolbox_Automated_Visual_Inspection_Library
+#product.Computer_Vision_Toolbox_Interface_for_OpenCV_in_MATLAB
+#product.Computer_Vision_Toolbox_Interface_for_OpenCV_in_Simulink
+#product.Computer_Vision_Toolbox_Model_for_Inflated-3D_Video_Classification
+#product.Computer_Vision_Toolbox_Model_for_Mask_R-CNN_Instance_Segmentation
+#product.Computer_Vision_Toolbox_Model_for_Object_Keypoint_Detection
+#product.Computer_Vision_Toolbox_Model_for_R(2+1)D_Video_Classification
+#product.Computer_Vision_Toolbox_Model_for_SOLOv2_Instance_Segmentation
+#product.Computer_Vision_Toolbox_Model_for_SlowFast_Video_Classification
+#product.Computer_Vision_Toolbox_Model_for_Text_Detection
+#product.Computer_Vision_Toolbox_Model_for_Vision_Transformer_Network
+#product.Computer_Vision_Toolbox_Model_for_YOLO_v2_Object_Detection
+#product.Computer_Vision_Toolbox_Model_for_YOLO_v3_Object_Detection
+#product.Computer_Vision_Toolbox_Model_for_YOLO_v4_Object_Detection
+#product.Computer_Vision_Toolbox_OCR_Language_Data
+#product.Data_Acquisition_Toolbox_Support_Package_for_Analog_Devices_ADALM1000_Hardware
+#product.Data_Acquisition_Toolbox_Support_Package_for_Digilent_Analog_Discovery_Hardware
+#product.Data_Acquisition_Toolbox_Support_Package_for_Measurement_Computing_Hardware
+#product.Data_Acquisition_Toolbox_Support_Package_for_National_Instruments_NI-DAQmx_Devices
+#product.Data_Acquisition_Toolbox_Support_Package_for_Windows_Sound_Cards
+#product.Database_Toolbox_Interface_for_Neo4j_Bolt_Protocol
+#product.Deep_Learning_HDL_Toolbox_Support_Package_for_Intel_FPGA_and_SoC_Devices
+#product.Deep_Learning_HDL_Toolbox_Support_Package_for_Xilinx_FPGA_and_SoC_Devices
+#product.Deep_Learning_Toolbox_Converter_for_ONNX_Model_Format
+#product.Deep_Learning_Toolbox_Converter_for_PyTorch_Model_Format
+#product.Deep_Learning_Toolbox_Converter_for_TensorFlow_models
+#product.Deep_Learning_Toolbox_Importer_for_Caffe_Models
+#product.Deep_Learning_Toolbox_Interface_for_TensorFlow_Lite
+#product.Deep_Learning_Toolbox_Model_Quantization_Library
+#product.Deep_Learning_Toolbox_Model_for_AlexNet_Network
+#product.Deep_Learning_Toolbox_Model_for_DarkNet-19_Network
+#product.Deep_Learning_Toolbox_Model_for_DarkNet-53_Network
+#product.Deep_Learning_Toolbox_Model_for_DenseNet-201_Network
+#product.Deep_Learning_Toolbox_Model_for_EfficientNet-b0_Network
+#product.Deep_Learning_Toolbox_Model_for_GoogLeNet_Network
+#product.Deep_Learning_Toolbox_Model_for_Inception-ResNet-v2_Network
+#product.Deep_Learning_Toolbox_Model_for_Inception-v3_Network
+#product.Deep_Learning_Toolbox_Model_for_MobileNet-v2_Network
+#product.Deep_Learning_Toolbox_Model_for_NASNet-Large_Network
+#product.Deep_Learning_Toolbox_Model_for_NASNet-Mobile_Network
+#product.Deep_Learning_Toolbox_Model_for_Places365-GoogLeNet_Network
+#product.Deep_Learning_Toolbox_Model_for_ResNet-101_Network
+#product.Deep_Learning_Toolbox_Model_for_ResNet-18_Network
+#product.Deep_Learning_Toolbox_Model_for_ResNet-50_Network
+#product.Deep_Learning_Toolbox_Model_for_ShuffleNet_Network
+#product.Deep_Learning_Toolbox_Model_for_VGG-16_Network
+#product.Deep_Learning_Toolbox_Model_for_VGG-19_Network
+#product.Deep_Learning_Toolbox_Model_for_Xception_Network
+#product.Deep_Learning_Toolbox_Verification_Library
+#product.Embedded_Coder_Interface_to_QEMU_Emulator
+#product.Embedded_Coder_Support_Package_For_Linux_Applications
+#product.Embedded_Coder_Support_Package_for_ARM_Cortex-A_Processors
+#product.Embedded_Coder_Support_Package_for_ARM_Cortex-M_Processors
+#product.Embedded_Coder_Support_Package_for_ARM_Cortex-R_Processors
+#product.Embedded_Coder_Support_Package_for_BeagleBone_Black_Hardware
+#product.Embedded_Coder_Support_Package_for_Infineon_AURIX_TC4x_Microcontrollers
+#product.Embedded_Coder_Support_Package_for_Intel_SoC_Devices
+#product.Embedded_Coder_Support_Package_for_STMicroelectronics_STM32_Processors
+#product.Embedded_Coder_Support_Package_for_Xilinx_Zynq_Platform
+#product.Ephemeris_Data_for_Aerospace_Toolbox
+#product.Extended_Tire_Features_for_Vehicle_Dynamics_Blockset
+#product.FMU_Builder_For_Simulink
+#product.GPU_Coder_Interface_for_Deep_Learning_Libraries
+#product.GUIDE_to_App_Designer_Migration_Tool_for_MATLAB
+#product.Geoid_Data_for_Aerospace_Toolbox
+#product.HDL_Coder_Support_Package_for_Intel_FPGA_Boards
+#product.HDL_Coder_Support_Package_for_Intel_SoC_Devices
+#product.HDL_Coder_Support_Package_for_Microchip_FPGA_and_SoC_Devices
+#product.HDL_Coder_Support_Package_for_Xilinx_FPGA_Boards
+#product.HDL_Coder_Support_Package_for_Xilinx_RFSoC_Devices
+#product.HDL_Coder_Support_Package_for_Xilinx_Zynq_Platform
+#product.HDL_Verifier_Support_Package_for_Intel_FPGA_Boards
+#product.HDL_Verifier_Support_Package_for_Microsemi_FPGA_Boards
+#product.HDL_Verifier_Support_Package_for_Xilinx_FPGA_Boards
+#product.Image_Acquisition_Toolbox_Support_Package_for_DCAM_Hardware
+#product.Image_Acquisition_Toolbox_Support_Package_for_Kinect_for_Windows_Sensor
+#product.Image_Acquisition_Toolbox_Support_Package_for_Matrox_Hardware
+#product.Image_Acquisition_Toolbox_Support_Package_for_National_Instruments_Frame_Grabbers
+#product.Image_Acquisition_Toolbox_Support_Package_for_OS_Generic_Video_Interface
+#product.Image_Acquisition_Toolbox_Support_Package_for_Point_Grey_Hardware
+#product.Image_Acquisition_Toolbox_Support_Package_for_Teledyne_DALSA_Sapera_Hardware
+#product.Image_Processing_Toolbox_Hyperspectral_Imaging_Library
+#product.Image_Processing_Toolbox_Image_Data
+#product.Instrument_Control_Toolbox_Support_Package_for_IVI_and_VXIplug&play_Drivers
+#product.Instrument_Control_Toolbox_Support_Package_for_Keysight_(Agilent)_IO_Libraries_and_VISA_Interface
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_NI-845x_I2C/SPI_Interface
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_NI-DCPower_Power_Supplies
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_NI-DMM_Digital_Multimeters
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_NI-FGEN_Function_Generators
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_NI-SCOPE_Oscilloscopes
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_NI-SWITCH_Hardware
+#product.Instrument_Control_Toolbox_Support_Package_for_National_Instruments_VISA_and_ICP_Interfaces
+#product.Instrument_Control_Toolbox_Support_Package_for_Rohde_Schwarz_VISA_Interface
+#product.Instrument_Control_Toolbox_Support_Package_for_Total_Phase_Aardvark_I2C/SPI_Interface
+#product.Integro-Differential_Modeling_Framework_for_MATLAB
+#product.Lidar_Toolbox_Support_Package_for_Ouster_Lidar_Sensors
+#product.Lidar_Toolbox_Support_Package_for_Velodyne_LiDAR_Sensors
+#product.MATLAB_Basemap_Data_-_bluegreen
+#product.MATLAB_Basemap_Data_-_colorterrain
+#product.MATLAB_Basemap_Data_-_grayland
+#product.MATLAB_Basemap_Data_-_grayterrain
+#product.MATLAB_Basemap_Data_-_landcover
+#product.MATLAB_Client_for_MATLAB_Production_Server
+#product.MATLAB_Coder_Interface_for_Deep_Learning_Libraries
+#product.MATLAB_Coder_Interface_for_Visual_Studio_Code_Debugging
+#product.MATLAB_Coder_Support_Package_for_NVIDIA_Jetson_and_NVIDIA_DRIVE_Platforms
+#product.MATLAB_Support_Package_for_Android_Sensors
+#product.MATLAB_Support_Package_for_Apple_iOS_Sensors
+#product.MATLAB_Support_Package_for_Arduino_Hardware
+#product.MATLAB_Support_Package_for_BeagleBone_Black_Hardware
+#product.MATLAB_Support_Package_for_LEGO_MINDSTORMS_EV3_Hardware
+#product.MATLAB_Support_Package_for_Quantum_Computing
+#product.MATLAB_Support_Package_for_Raspberry_Pi_Hardware
+#product.MATLAB_Support_Package_for_USB_Webcams
+#product.MATLAB_Support_for_MinGW-w64_C/C++_Compiler
+#product.Medical_Imaging_Toolbox_Interface_for_Cellpose_
+#product.Mixed-Signal_Blockset_Models
+#product.Modelscape_for_MATLAB
+#product.Powertrain_Blockset_Drive_Cycle_Data
+#product.RF_Blockset_Models_for_Analog_Devices_RF_Transceivers
+#product.ROS_Toolbox_Support_Package_for_TurtleBot-Based_Robots
+#product.Radar_Toolbox_Support_Package_for_Texas_Instruments_mmWave_Radar_Sensors
+#product.Robotics_System_Toolbox_Robot_Library_Data
+#product.Robotics_System_Toolbox_Support_Package_for_KINOVA_Gen3_Manipulators
+#product.Robotics_System_Toolbox_Support_Package_for_Universal_Robots_UR_Series_Manipulators
+#product.Scenario_Builder_for_Automated_Driving_Toolbox
+#product.Scenario_Variant_Generator_for_Automated_Driving_Toolbox
+#product.Signal_Processing_Toolbox_Support_Package_for_Linux_IIO_Devices
+#product.Simulink_Coder_Support_Package_for_ARM_Cortex-based_VEX_Microcontroller
+#product.Simulink_Coder_Support_Package_for_BeagleBone_Blue_Hardware
+#product.Simulink_Coder_Support_Package_for_NXP_FRDM-K64F_Board
+#product.Simulink_Coder_Support_Package_for_NXP_FRDM-KL25Z_Board
+#product.Simulink_Coder_Support_Package_for_STMicroelectronics_Nucleo_Boards
+#product.Simulink_Coder_Support_Package_for_VEX_EDR_V5_Robot_Brain
+#product.Simulink_Interface_for_Siemens_MF-Tyre/MF-Swift_Tire_Model
+#product.Simulink_Real-Time_XIL_Support_Package
+#product.Simulink_Support_Package_for_Android_Devices
+#product.Simulink_Support_Package_for_Arduino_Hardware
+#product.Simulink_Support_Package_for_LEGO_MINDSTORMS_EV3_Hardware
+#product.Simulink_Support_Package_for_Parrot_Minidrones
+#product.Simulink_Support_Package_for_Raspberry_Pi_Hardware
+#product.Simulink_Test_Support_Package_for_ASAM_XIL
+#product.SoC_Blockset_Support_Package_for_AMD-Xilinx_Versal_ACAP_Devices
+#product.SoC_Blockset_Support_Package_for_Embedded_Linux_Devices
+#product.SoC_Blockset_Support_Package_for_Infineon_AURIX_Microcontrollers
+#product.SoC_Blockset_Support_Package_for_Intel_Devices
+#product.SoC_Blockset_Support_Package_for_Xilinx_Devices
+#product.Source_control_integration_with_Microsoft(R)_Source-Code_Control_Interface_(MSSCCI)_for_MATLAB_and_Simulink
+#product.Streaming_Data_Framework_for_MATLAB_Production_Server
+#product.Text_Analytics_Toolbox_Model_for_BERT-Base_Multilingual_Cased_Network
+#product.Text_Analytics_Toolbox_Model_for_BERT-Base_Network
+#product.Text_Analytics_Toolbox_Model_for_BERT-Large_Network
+#product.Text_Analytics_Toolbox_Model_for_BERT-Mini_Network
+#product.Text_Analytics_Toolbox_Model_for_BERT-Small_Network
+#product.Text_Analytics_Toolbox_Model_for_BERT-Tiny_Network
+#product.Text_Analytics_Toolbox_Model_for_fastText_English_16_Billion_Token_Word_Embedding
+#product.Text_Analytics_Toolbox_Model_from_UDify_Data
+#product.UAV_Toolbox_Interface_for_Unreal_Engine_Projects
+#product.UAV_Toolbox_Support_Package_for_PX4_Autopilots
+#product.Variant_Manager_for_Simulink
+#product.Vehicle_Dynamics_Blockset_Interface_for_Unreal_Engine_4_Projects
+#product.Vehicle_Dynamics_Blockset_Maneuver_Data
+#product.Vision_HDL_Toolbox_Support_Package_for_Xilinx_Zynq-Based_Hardware
+#product.WINNER_II_Channel_Model_for_Communications_Toolbox
+#product.Wireless_Testbench_Support_Package_for_NI_USRP_Radios
+
+
+########################################################################
+## CHECKSUM
+########################################################################
+##
+## NOTE: DO NOT edit this field. MathWorks uses this field to
+## check the integrity of the input file. Changing the value
+## of the checksum field invalidates this input file.
+
+?checksum=UjIwMjNi
--- a/machines/kcnhub/secrets/matlab-network.lic
+++ b/machines/kcnhub/secrets/matlab-network.lic
@ -0,0 +1,20 @@
+{
+	"data": "ENC[AES256_GCM,data:JrTc6ZePtcii5ygWjkFatJUJNiEUa6eFzsWVJWdPwDche9O68oD+rDpHe5CTjWzsXQB9,iv:+LkH3EAi8aUzABBLQ/FJwFPtEvgUb+MN2LFvehN+2/M=,tag:C2M9ChEdpKehzMaM5Gd3bA==,type:str]",
+	"sops": {
+		"kms": null,
+		"gcp_kms": null,
+		"azure_kv": null,
+		"hc_vault": null,
+		"age": [
+			{
+				"recipient": "age1cvmffz227lhsvy4ufh0gnkfsvs5f27hv5l90m0lf4558uphteefsj2t74j",
+				"enc": "-----BEGIN AGE ENCRYPTED FILE-----\nYWdlLWVuY3J5cHRpb24ub3JnL3YxCi0+IFgyNTUxOSBvb0FWYmUwN2QvdWdWbTNS\nSll1VWVRQVRJb1FVT2YyeWVEV1A0dVljS2pZCndRTnNUYk82dytNMjdIQWZ1b3pu\nRjBQZXIwVVlza01lMlNtVlhtRm9JTTQKLS0tIHZZdEtRL1I0djhOL2dkSkhleW83\nWHM4cUZKY1M0QnpCRTMzMDRIWHJTbFEKI85Z0wTXVkUE3KtTjfyzSYCDT2EQmZWf\nSq8FZuUlzGfVfh+R+gUZ1g8V76gNwzHI55MM+CEBh6EuVSyotY0AEA==\n-----END AGE ENCRYPTED FILE-----\n"
+			}
+		],
+		"lastmodified": "2024-02-07T16:50:53Z",
+		"mac": "ENC[AES256_GCM,data:wzjlt/EoF1KJ3oDw/bqkPAxTO+hGS4eWtHERD6HT0FkseHVoXVo+n53SDAkj7z8vnsx3au8QhP8FL8JWoyDVf0SrHHk7W8cqV203eUnVapJsV9IanOvCfvcENrQ2eLV8R97t3nUfyfcABUK45fL6ku6jZ3sKsS2U1eS7/atENmU=,iv:fUWBcvAcckCnEKfYQeSebYQS+0jzzvlXtBen2VL+Lqc=,tag:Fap2p5nRewKbVXa0eEUUbg==,type:str]",
+		"pgp": null,
+		"unencrypted_suffix": "_unencrypted",
+		"version": "3.8.1"
+	}
+}
--- a/machines/kcnhub/secrets/matlab.lic
+++ b/machines/kcnhub/secrets/matlab.lic
--- a/machines/kcnhub/servers.nix
+++ b/machines/kcnhub/servers.nix
@ -10,5 +10,7 @@
    ./servers/overleaf.nix
    # Basic remote editting in jupyer notebooks
    ./servers/jupyterhub.nix
+    # MATLAB License Server
+    ./servers/matlab-license-server.nix
  ];
 }
--- a/machines/kcnhub/servers/gitea.nix
+++ b/machines/kcnhub/servers/gitea.nix
@ -43,9 +43,8 @@ in {
    port = 5432;
    ensureUsers = [{
      name = "gitea";
-      ensurePermissions = {
-        "DATABASE \"gitea\"" = "ALL PRIVILEGES";
-      };
+      # Ensures gitea user owns a db called gitea
+      ensureDBOwnership = true;
      ensureClauses = {
        createdb = true;
      };
--- a/machines/kcnhub/servers/guac.nix
+++ b/machines/kcnhub/servers/guac.nix
@ -1,9 +1,4 @@
 { config, lib, pkgs, nixpkgs-unstable, ... }: {
-  imports = [
-    "${nixpkgs-unstable}/nixos/modules/services/web-apps/guacamole-server.nix"
-    "${nixpkgs-unstable}/nixos/modules/services/web-apps/guacamole-client.nix"
-  ];
-
  services.guacamole-server.enable = true;
  services.guacamole-server.package = pkgs.unstable.guacamole-server;
  services.guacamole-server.port = 4822;
@ -58,9 +53,8 @@
    ];
    ensureUsers = [{
      name = "guacamole";
-      ensurePermissions = {
-        "DATABASE \"guacamole\"" = "ALL PRIVILEGES";
-      };
+      # Ensures guacamole user owns a db called guacamole
+      ensureDBOwnership = true;
      ensureClauses = {
        createdb = true;
      };
--- a/machines/kcnhub/servers/jupyterhub.nix
+++ b/machines/kcnhub/servers/jupyterhub.nix
@ -1,51 +1,251 @@
-{ config, pkgs, lib, ... }: {
+{ config, pkgs, lib, ... }: let
+  aiomcache = pkgs.python3.pkgs.buildPythonPackage rec {
+    pname  = "aio-memcache";
+    version = "0.8.1";
+
+    src = pkgs.fetchFromGitHub {
+      owner = "aio-libs";
+      repo = "aiomcache";
+      rev = "v${version}";
+      hash = "sha256-oRMN1seEjFSsq4wjkIXHM7Osq8y/5WFExGCEr6eM9vc=";
+    };
+
+    propagatedBuildInputs = with pkgs.python3.pkgs; [
+      python-memcached
+    ];
+
+    # Networking required
+    doCheck = false;
+  };
+  aiohttp-session = pkgs.python3.pkgs.buildPythonPackage rec {
+    pname = "aiohttp-session";
+    version = "2.12.0";
+
+    src = pkgs.fetchFromGitHub {
+      owner = "aio-libs";
+      repo = "aiohttp-session";
+      rev = "v${version}";
+      hash = "sha256-7MNah4OIQnoxLoZkLOdeu5uCwSyPMhc6Wsht8dFconc=";
+    };
+
+    propagatedBuildInputs = with pkgs.python3.pkgs; [
+      aiohttp
+      aiomcache
+      cryptography
+      multidict
+      pynacl
+      redis
+      yarl
+    ];
+
+    # Checks require networking
+    doCheck = false;
+  };
+  matlab-proxy = pkgs.python3.pkgs.buildPythonPackage rec {
+    pname = "matlab_proxy";
+    version = "0.12.1";
+    format = "wheel";
+    src = pkgs.python3.pkgs.fetchPypi {
+      inherit pname version format;
+      dist = "py3";
+      python = "py3";
+      hash = "sha256-TDZUJEXJYF5Vh2BG5o13H3wdh/WdVdoESXqL89ckc6I=";
+    };
+    
+    propagatedBuildInputs = with pkgs.python3.pkgs; [
+      aiohttp
+      aiohttp-session
+      psutil
+
+      # For Xvfb, for plots and graphics
+      pkgs.xorg.xorgserver
+    ];
+  };
+  simpervisor = pkgs.python3.pkgs.buildPythonPackage rec {
+    pname = "simpervisor";
+    version = "1.0.0";
+    format = "pyproject";
+
+    src = pkgs.fetchFromGitHub {
+      owner = "jupyterhub";
+      repo = "simpervisor";
+      rev = "v${version}";
+      hash = "sha256-73vkiQtOT0M9Vww1nYZ76JR2koWt/NPIav46k1fHOzc=";
+    };
+
+    nativeBuildInputs = with pkgs.python3.pkgs; [
+      hatchling
+    ];
+  };
+  jupyter-server-proxy = pkgs.python3.pkgs.buildPythonPackage rec {
+    pname = "jupyter_server_proxy";
+    version = "4.1.0";
+    format = "pyproject";
+
+    src = pkgs.python3.pkgs.fetchPypi {
+      inherit pname version;
+      hash = "sha256-LPrDtCMv5xROjmApa0+GFwi08TspJgos8ol2v45hf3A=";
+    };
+
+    nativeBuildInputs = with pkgs.python3.pkgs; [
+      hatchling
+      hatch-jupyter-builder
+      hatch-nodejs-version
+      jupyterlab
+    ];
+    
+    propagatedBuildInputs = with pkgs.python3.pkgs; [
+      notebook
+      simpervisor
+      aiohttp
+    ];
+    
+    # tests require network
+    doCheck = false;
+  };
+  
+  jupyter-matlab-proxy = pkgs.python3.pkgs.buildPythonPackage rec {
+    pname = "jupyter_matlab_proxy";
+    version = "0.11.0";
+    format = "wheel";
+
+    src = pkgs.python3.pkgs.fetchPypi {
+      inherit pname version format;
+      python = "py3";
+      dist = "py3";
+      hash = "sha256-KzQgs1zXGPjONCnLvCNQkQBkkkn9J29YFi8BHbh+D1I=";
+    };
+
+    propagatedBuildInputs = with pkgs.python3.pkgs; [
+      jupyter-server-proxy
+      simpervisor
+      matlab-proxy
+      psutil
+      requests
+      ipykernel
+    ];
+  };
+  in {
  services.jupyterhub = {
    enable = true;
    port = 6501;
    # https://github.com/jupyterhub/systemdspawner
    # Configuration options defined ^
+    # mem_limit must be higher to allow for MATLAB
    extraConfig = ''
-      c.SystemdSpawner.mem_limit = '2G'
-      c.SystemdSpawner.cpu_limit = 1.0
-    '';
-    kernels = {
-      python = {
-        python3 = let
-          env = (pkgs.python3.withPackages (pythonPackages: with pythonPackages; [
-            # Necessary for use as a kernel
-            ipykernel
-
-            # Common Python Libraries
-            numpy
-            scipy
-            scikit-learn
-            pandas
-            matplotlib
-            seaborn
-
-            # Neural Data Processing Libraries
-            mne-python
-            nibabel
-            neo
-            
-            # Neurosimulators
-            neuronpy
-            nest
-            brian2
-          ]));
-        in {
-          displayName = "Python 3 for Computational Neuroscience";
-          argv = [
-            "${env.interpreter}"
-            "-m"
-            "ipykernel_launcher"
-            "-f"
-            "{connection_file}"
+      c.SystemdSpawner.mem_limit = '8G'
+      c.SystemdSpawner.cpu_limit = 2.0
+      c.SystemdSpawner.isolate_devices = False
+      c.SystemdSpawner.extra_paths = [
+        '${pkgs.buildEnv {
+          name = "jupyterhub-system-spawner-env";
+          paths = with pkgs; [
+            gcc
+            # For MATLAB Kernel
+            matlab
+            # For matlab-proxy-app
+            (pkgs.python3.withPackages (p: with p; [
+              # For pkg_resources
+              setuptools
+              matlab-proxy
+              jupyter-matlab-proxy
+            ]))
          ];
-          language = "python";
-          logo32 = "${env}/${env.sitePackages}/ipykernel/resources/logo-32x32.png";
-          logo64 = "${env}/${env.sitePackages}/ipykernel/resources/logo-64x64.png";
-        };
+        }}/bin']
+      c.SystemdSpawner.environment["MATLAB_INSTALL_DIR"] = "${config.environment.sessionVariables.MATLAB_INSTALL_DIR}"
+      c.SystemdSpawner.environment["LM_LICENSE_FILE"] = "${config.environment.sessionVariables.LM_LICENSE_FILE}"
+      c.SystemdSpawner.environment["MLM_LICENSE_FILE"] = "${config.environment.sessionVariables.MLM_LICENSE_FILE}"
+      # c.SystemdSpawner.environment["MWI_JUPYTER_LOG_LEVEL"] = "DEBUG"
+    '';
+    # Extra Paths used to add gcc et al for packages like Brian2
+    # https://github.com/jupyterhub/systemdspawner#extra_paths
+
+    jupyterlabEnv = pkgs.python3.withPackages (p: with p; [
+      jupyterhub
+      jupyterlab
+      # Extensions:
+      jupyter-collaboration
+      jupyter-server-mathjax
+      jupyter-console
+      jupyterlab-lsp
+      python-lsp-server
+      # MATLAB Proxy Needs to be here in order to modify and add the "launch matlab" etc.
+      jupyter-matlab-proxy # <-- This in effect adds the kernel
+    ]);
+    
+    kernels = {
+      python3 = let
+        env = (pkgs.python3.withPackages (pythonPackages: with pythonPackages; [
+          # Necessary for use as a kernel
+          ipykernel
+          ipdb
+          # Interactive widgets
+          ipywidgets
+          # Show images/media
+          mediapy
+          # Progress bars etc. for in Jupyter/IPython
+          halo
+
+          # Common Python Libraries
+          numpy
+          scipy
+          scikit-learn
+          pandas
+          # Tables displayed in Jupyter: like Pandas Dataframes
+          ipytablewidgets
+          matplotlib
+          ipympl
+          matplotlib-inline
+          seaborn
+
+          # Neural Data Processing Libraries
+          # Temporarily broken?: https://github.com/NixOS/nixpkgs/issues/259812
+          # mne-python
+          nibabel
+          # View niftis!
+          ipyniivue
+          neo
+          
+          # Neurosimulators
+          neuronpy
+          # nest with MPI is incompatible with Jupyter:
+          # https://www.nest-simulator.org/pynest-api/_modules/nest.html
+          # see pynestkernel comments about their workaround
+          (nest.override {
+            withMpi = false;
+          })
+          brian2
+
+          # Machine learning toolkits:
+          tensorflow
+          tensorboard
+          keras
+          edward
+          transformers
+          tflearn
+          torch
+          torchvision
+          torchsde
+          torchmetrics
+          torchio
+          torchdiffeq
+          botorch
+          lion-pytorch
+        ])).override (args: { ignoreCollisions = true; });
+        # Odd collision between tensorboard of torch & tensorflow
+        # need to resolve later
+      in {
+        displayName = "Python 3 for Computational Neuroscience";
+        argv = [
+          "${env.interpreter}"
+          "-m"
+          "ipykernel_launcher"
+          "-f"
+          "{connection_file}"
+        ];
+        language = "python";
+        logo32 = "${env}/${env.sitePackages}/ipykernel/resources/logo-32x32.png";
+        logo64 = "${env}/${env.sitePackages}/ipykernel/resources/logo-64x64.png";
      };
    };
  };
@ -57,5 +257,4 @@
      '';           
    };
  };
-
 }
--- a/machines/kcnhub/servers/matlab-license-server.nix
+++ b/machines/kcnhub/servers/matlab-license-server.nix
@ -0,0 +1,91 @@
+{ config, lib, pkgs, ... }: let
+  # Make sure that the license manager version matches the currently
+  # issued license to KCNHUB in the License Centre.
+  license-manager = pkgs.stdenv.mkDerivation rec {
+    pname = "matlab-license-server";
+    version = "R2023b";
+    src = pkgs.fetchurl {
+      url = "https://ssd.mathworks.com/supportfiles/downloads/${version}/license_manager/${version}/daemons/glnxa64/mathworks_network_license_manager_glnxa64.zip";
+      hash = "sha256-Btl3ETzTtAV+cjqwXf4AE4QJCtssN1s6dmmcpR1EQxY=";
+    };
+    nativeBuildInputs = [
+      pkgs.autoPatchelfHook
+    ];
+    unpackPhase = ''
+      ${pkgs.unzip}/bin/unzip $src
+    '';
+    installPhase = ''
+      mkdir $out
+      cp -r * $out/
+      addAutoPatchelfSearchPath $out/*
+    '';
+  };
+  matlab-server-user = "matlab-server";
+  homedir = "/var/lib/${matlab-server-user}";
+
+  # Make sure this is up to date with the latest license file
+  # by editting secrets/matlab-network.lic
+  NETWORK_LICENSE = config.sops.secrets.matlab-network-license.path;
+
+  PORT = 27000;
+in {
+  users.users.${matlab-server-user} = {
+    isSystemUser = true;
+    home = homedir;
+    useDefaultShell = true;
+    group = matlab-server-user;
+  };
+  users.groups.${matlab-server-user} = {};
+
+  sops.secrets.matlab-license = {
+    sopsFile = ../secrets/matlab.lic;
+    format = "binary";
+
+    owner = matlab-server-user;
+    restartUnits = [ "matlab-license-server.service" ];
+  };
+  sops.secrets.matlab-network-license = {
+    sopsFile = ../secrets/matlab-network.lic;
+    format = "binary";
+
+    owner = matlab-server-user;
+    mode = "0444";
+    restartUnits = [ "matlab-license-server.service" ];
+  };
+
+  systemd.services.matlab-license-server = {
+    # Start on boot
+    enable = true;
+    # When multi user login is loaded, matlab-server user can be used
+    wantedBy = [ "multi-user.target" ];
+    # The license server has to be after networking is available
+    after = [ "network.target" ];
+    description = "MATLAB License Server";
+    serviceConfig = {
+      Type = "forking";
+      User = matlab-server-user;
+      Group = matlab-server-user;
+      RuntimeDirectory = matlab-server-user;
+      WorkingDirectory = homedir;
+      ExecStartPre = pkgs.writeScript "matlab-license-serverify" ''
+        #!${pkgs.bash}/bin/bash
+        head -n1 ${NETWORK_LICENSE} > ${homedir}/license.lic
+        echo 'DAEMON MLM DAEMON MLM ${license-manager}/etc/glnxa64/MLM' >> ${homedir}/license.lic
+        cat ${config.sops.secrets.matlab-license.path} >> ${homedir}/license.lic
+      '';
+      ExecStart = "${license-manager}/etc/glnxa64/lmgrd -c ${homedir}/license.lic";
+    };
+  };
+
+  environment.sessionVariables = {
+    LM_LICENSE_FILE = NETWORK_LICENSE;
+    MLM_LICENSE_FILE = NETWORK_LICENSE;
+  };
+
+  networking.firewall.allowedTCPPorts = [
+    PORT
+  ];
+  networking.firewall.allowedUDPPorts = [
+    PORT
+  ];
+}
--- a/machines/kcnhub/users.nix
+++ b/machines/kcnhub/users.nix
@ -5,7 +5,6 @@
    ./users/carol.nix
    ./users/alan.nix
    ./users/spandan.nix
-    ./users/matlab-server.nix
    ./users/frances.nix
    ./users/srikar.nix
    ./users/zhenyangsun.nix
--- a/machines/kcnhub/users/matlab-server.nix
+++ b/machines/kcnhub/users/matlab-server.nix
@ -1,10 +0,0 @@
-{ pkgs, ... }: {
-  users.users.matlab-server = {
-    isNormalUser = true;
-    homeSize = "15g";
-    homeProjectId = 105;
-    packages = with pkgs; [
-
-    ];
-  };
-}
Author	SHA1	Message	Date
David Crompton	4d186c69bc	JupyterHub: Added MATLAB Kernel & Web App	2024-02-07 17:20:01 -05:00
David Crompton	fca8aacba7	Matlab: System Wide MATLAB Installation	2024-02-07 14:00:16 -05:00
David Crompton	af5774ba66	Matlab License Server Update Matlab License to Include "SERVER {hostname} {HostID} 27000" Update MATLAB License for DAEMON line Matlab: Update Concurrent License Matlab: Cleanup Config Matlab: Hide HOSTID in secrets	2024-02-07 14:00:11 -05:00
David Crompton	9fd4f2c67c	JupyterHub: Machine learning toolkits addition	2024-02-02 18:27:57 -05:00
David Crompton	fb5ebf1be0	Add JupyterHub Extension (e.g. Collaboration)	2024-01-23 14:06:26 -05:00
David Crompton	9e7069e2d9	Revert System MATLAB (Almost Ready)	2024-01-17 17:23:08 -05:00
David Crompton	f5d3abb2b3	Add gcc to jupyter path	2024-01-17 17:20:04 -05:00
David Crompton	6b290b11b4	Systemwide Matlab Installation	2024-01-16 23:37:56 -05:00
David Crompton	9adfae87ee	Jupyterhub: QOL & NEST Fix (MPI remove)	2024-01-16 15:00:48 -05:00
David Crompton	22e4f6b232	Jupyterhub: Temporary mne-python issue	2024-01-16 13:57:25 -05:00
David Crompton	3e488d7da0	24.05 Preparation	2024-01-16 11:22:24 -05:00
David Crompton	cd6c4635b3	JupyterHub: Fix python kernel definition	2024-01-16 11:17:40 -05:00
David Crompton	fe1b1adf8c	NixOS 23.05 -> 23.11 flake.lock: Update Flake lock file updates: • Updated input 'nixpkgs': 'github:NixOS/nixpkgs/70bdadeb94ffc8806c0570eb5c2695ad29f0e421' (2024-01-03) → 'github:NixOS/nixpkgs/b8dd8be3c790215716e7c12b247f45ca525867e2' (2024-01-15)	2024-01-16 11:11:06 -05:00